Ayan Mandal

Experience

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  National Institute for Research in Reproductive Health (NIRRH)

  May 2017 - Jul 2017

  Research Trainee

  Worked on Systems Biology Approach for understanding the pathogenicity mechanism of Candida tropicalis using Flux Balance Analysis method.Used Python based constraint-based modeling package COBRA for deterimining the flux balance in the whole genomic metabolomic model of C.tropicalisThe research was in collaboration with Indian Institute of Technology- Bombay.

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  Foundation for Medical Research

  May 2019 - May 2021

  Bioinformatics Data Analyst and Data Manager

  Analysing and executing several research projects:*Data analysis and curation of 7000+ MTB whole genome samples for determination of variants and lineages (Part of CRYPTic Consortium)*Analysis of new and repurposed drugs related to TB for indentification of novel mutations*Understanding the transmission of TB through genetic epidemiology in the Mumbai Metropolitian Region*Analysis of long read sequencing from the direct sputum samples of TB infected patients*Covid sequencing and analysis to determine the lineage, genomic load and integrityWorked on research grant proposals and communications with other researchers and collaborators for fulfillment of the projects.Analytical works includes: Variant calling and Lineage of Whole genome, RNA-seq, Biostatistics Show less

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  Genotypic Technology

  Jun 2021 - May 2023

  Senior Scientific Analyst

  *Handled analysis of WGS, WMG, WTA, WES and Mitochondrial Sequencing.*Worked on ONT data analysis*Worked on Whole genome complete characterization for food regulatory projects*External and Internal Stakeholder interaction fro completion of projects*Client Communation for report explaination*Reporting and interpretaion of results

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  Eurofins Genomics India Pvt Ltd.

  Jun 2023 - now

  Scientist-I

  *Development and execution of pipelines based on current trends in the market*Execution of Projects*Handling post projects queries of clients