Prabir Saha

Prabir Saha

Next Generation Sequncing

Followers of Prabir Saha3000 followers
location of Prabir SahaBengaluru, Karnataka, India

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  • Timeline

  • About me

    Clinical Bioinformatician - III @ 4BaseCare | Precision medicine and NGS | Cancer Genomics | Data Science | ML & AI

  • Education

    • Siliguri Barada Kantha Vidhy Pith

      2009 - 2016
      High School Science stream Garde A

      Class 5 to 12 PCMB

    • Institute of Genetic Engineering 210

      2016 - 2019
      Bachelor of Science Biotechnology

      Activities and Societies: Dissertation:- Design a website on Dengue Fever Bachelor of science in Biotechnology is the use of biology to solve problems and make useful products. The most prominent approach used is genetic engineering, which enables scientists to tailor an organism’s DNA at will.

    • Central University of South Bihar

      2019 - 2021
      Master of Science - MSc Bioinformatics

      Master of Science in Bioinformatics with major subjects Bioinformatics Fundamentals, Cheminformatics, Biochemistry, Computing Fundamentals, Data Structures, Biostatistics, System Biology, Database Management Systems, Computer Aided Drug Design(CADD), Programming C, SQL, BIOPERL, Computational Methods for Data Analysis, Modern Biology Experimental Techniques, Genomics and Proteomics.::- Minor Project(2020) was Completed Under the guidance of Dr. Ajay Kumar Sing -::… Show more Master of Science in Bioinformatics with major subjects Bioinformatics Fundamentals, Cheminformatics, Biochemistry, Computing Fundamentals, Data Structures, Biostatistics, System Biology, Database Management Systems, Computer Aided Drug Design(CADD), Programming C, SQL, BIOPERL, Computational Methods for Data Analysis, Modern Biology Experimental Techniques, Genomics and Proteomics.::- Minor Project(2020) was Completed Under the guidance of Dr. Ajay Kumar Sing -:: Title: Comparative analyses of SARS-CoV2 genomes from different geographical locations reveal unique features of host-virus interaction and pathogenesis.::- Final Year Project(2021) was Completed Under the guidance of Dr. Anil Kumar-:: Title: In-silico studies on ornithine decarboxylase to aid treatment of visceral leishmaniasis Show less

  • Experience

    • Xcelris Labs Ltd.

      Apr 2018 - Apr 2018
      Next Generation Sequncing

      NGS workshopThe massively parallel sequencing technology known as next-generation sequencing (NGS) has revolutionized the biological sciences. With its ultra-high throughput, scalability, and speed, NGS enables researchers to perform a wide variety of applications and study biological systems at a level never before possible.Today's complex genomic research questions demand a depth of information beyond the capacity of traditional DNA sequencing technologies. Next-generation sequencing has filled that gap and become an everyday research tool to address these questions. Show less

    • Council for Scientific and Industrial Research (CSIR)

      Jun 2020 - Aug 2020
      Summer Intern

      Online Summer Internship CSIR-NEIST,:-Interdisciplinary approach for precision agriculture.-: Studies of pests and diseases of crops in your region Objectives of the project:i) Documentation of pests and diseases of different agricultural crops.ii) Documentation of different management practices of each of the pests anddiseases.

    • Central University of South Bihar

      Jan 2021 - Jun 2021
      Dissertation Trainee

      In silico Studies on ornithine decarboxylase to aid treatment of visceral leishmaniasisHomology Modelling of the traget (ornithine decarboxylase)Perform Docking by the anti-leishmanial plant metabolites and Observed the physical movement of protein-ligand complex.

    • 4baseCare

      Oct 2021 - now

      Led the development of innovative bioinformatics strategies to drive research objectives, providing critical direction and insights.Designed and implemented robust validation frameworks for bioinformatics tools, ensuring reliability and reproducibility.Optimized algorithms and workflows using advanced computational techniques to expedite data analysis and enhance accuracy.Guided collaborative efforts with multidisciplinary teams, mentoring junior bioinformaticians, and contributing findings through publications and presentations. Show less Innovative Strategy Development: Spearheaded the development of innovative bioinformatics strategies, providing direction and insights to drive research objectives. Validation Frameworks: Design and implement robust validation frameworks for bioinformatics tools and methodologies, ensuring reliability and reproducibility of research outcomes. Optimization Initiatives: Optimize algorithms and workflows, harnessing advanced computational techniques to expedite data analysis and enhance accuracy. Collaborative Oversight: Lead collaborative efforts with multidisciplinary teams, guiding and mentoring junior bioinformaticians, fostering an environment of innovation and excellence. Communication & Dissemination: Present findings, methodologies, and discoveries through publications and presentations, contributing to the scientific community. Show less Develop, implement, and execute a robust analysis pipeline for whole exome, targeted gene panel, and transcriptome analysis.Provide expert selection and application of data management and analysis tools to ensure high-quality results.Determine suitable analytical and data mining tools and databases to achieve project objectives.Stay updated with the latest developments in the field and share knowledge with the team.Contribute to NGS data analysis infrastructure development and operation to ensure optimal performance.Identify valuable data resources and automate the collection of data in-house to improve efficiency and accuracy. Show less

      • Clinical Bioinformatician III

        Apr 2024 - now
      • Clinical Bioinformatician II

        Jul 2023 - Apr 2024
      • Associate clinical Bioinformatician

        Nov 2021 - Jul 2023
      • Clinical Bioinformatics Intern

        Oct 2021 - Nov 2021
  • Licenses & Certifications

    • Summer training Certification

      NEIST Jorhat
      Oct 2020
    • Introduction to Programming Using Python

      GUVI Geek Networks, IITM Research Park
      Jul 2020
      View certificate certificate
    • Artificial intelligence

      Accenture
      Jun 2020
      View certificate certificate
    • Artificial Intelligence &Drug Discovery

      Shri Vithal Education & Research Institute
      Jun 2020
    • Machine learning

      Shri Vithal Education & Research Institute
      Jun 2020
    • Introduction to IoT

      Cisco Networking Academy
      Jul 2020
    • Human Molecular Genetics NPTEL

      Indian Institute of Technology, Kanpur
      Mar 2021
      View certificate certificate
    • ADVANCED COURSES AND SCIENTIFIC CONFERENCES

      Royal College of Pathologists (RCPath)
      Jun 2020
      View certificate certificate