Bram Koster

Bram Koster

Project manager microscopy automation

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location of Bram KosterAmsterdam, North Holland, Netherlands

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  • Timeline

  • About me

    Full professor Electron Microscopy

  • Education

    • Mr. S. Vissering Scholengemeenschap, Velsen, The Netherlands

      1973 - 1979
      Pre-university Physics, Chemistry, Mathematics, English, German, Dutch

      Voortgezet Wetenschappelijk Onderwijs (VWO)

    • Delft University of Technology

      1979 - 1983
      Bachelor of Science (BSc) Engineering Physics/Applied Physics, Computer science
    • Delft University of Technology

      1985 - 1989
      PhD Physics, System Control, Particle optics, Electron microscopy, Image Processing, Data Science
    • Delft University of Technology

      1983 - 1985
      Master of Science (MSc) Physics, Systems and Signals, BA, Modeling, Parameter Estimation, Statistical Learning
  • Experience

    • TVIPS GmbH

      Sept 1989 - Aug 1991
      Project manager microscopy automation

      Automation of electron microscopy. Image processing. Digital image recording.

    • UCSF Medical Center

      Sept 1991 - Aug 1993
      Postdoctoral Research Fellow

      Postdoctoral fellow in the Molecular Structure group of David Agard. Development and application of specialized electron microscopy techniques: 3D Electron tomography, Automation,TEM, Stained sections, Chromatin.

    • Max-Planck-Institute for Biochemistry, Martinsried, Germany

      Sept 1993 - Dec 1997
      Postdoctoral Research Fellow

      Postdoctoral fellow in the Molecular Structural Biology group of Wolfgang Baumeister. Development and application of specialized electron microscopy techniques: 3D Cryo electron tomography, Automation, Cryo-TEM, Macromolecular structures, Proteasomes.

    • Utrecht University

      Jan 1998 - Dec 2005

      Associate professor (UHD) in the group of Arie Verkleij. Acquisition of funding. Supervision of PhD students and technicians. Electron tomography. Development and application of specialized electron microscopy techniques: 3D Electron Microscopy, Electron Tomography, STEM, Energy-filtering, Gold-Labeling, Stained sections.

      • Staff Scientist Electron Microscopy

        Jan 1998 - Dec 2005
      • Research Fellow of the Royal Academy of Sciences (KNAW)

        Jan 1998 - Dec 2002
    • Leiden University Medical Center

      Jan 2006 - now

      Full professor Electron Microscopy. Working on fundamental research topics as well as on advanced applications of light and electron microscopy techniques. Techniques and methods include cryo electron tomography, cryo electron microscopy, serial block face SEM and multimodal, multi-scale imaging. Interested in automation of microscopy workflows, ranging from instrumentation control to annotation of cell morphologies, using conventional image processing approaches as well as artificial intelligence and machine learning. Show less Management of the research group, defining long-term scientific research goals, acquisition of funding, collaborations with other scientific and industrial research groups, effective and efficient embedding of the microscopy research group within the Leiden University Medical Center to contribute to its overall mission. Management of the Section Light and Electron Microscopy, defining long-term research lines and positioning the Section with the overall organization of the Leiden University Medical Center. Roles in various in-house, national and international committees and organizations. Show less

      • Professor Electron Microscopy, Faculty of Medicine

        Jan 2007 - now
      • Head Section Electron Microscopy

        Jan 2006 - May 2022
    • Netherlands Center for Electron Nanoscopy (NeCEN)

      Sept 2015 - Oct 2018
      Scientific Director

      NeCEN is the Netherlands Center of Electron Nanoscopy. NeCEN is the open access facility for cryo-TEM in The Netherlands. Management of the center, defining long-term scientific research goals, acquisition of funding, realizing collaborations with international scientific and industrial partners, effective and efficient embedding of the NeCEN within the Dutch and European electron microscopy community.

    • Leiden University

      Sept 2015 - now
      Professor Nanobioimaging, Faculty of Science

      Professor Nanobioimaging at the Faculty of Science within the Institute of Biology. Development and application of cryo electron microscopy methods and techniques.

    • Centro Nacional de Biotecnología (CNB-CSIC)

      Oct 2022 - Oct 2022
      Visiting Scientist

      Cryo tomography workflows with Scipion

    • UCSF SCHOOL OF MEDICINE

      Mar 2023 - May 2023
      Sabbatical

      Collaboration on cryo tomography structure determination methods in the Macromolecular Structure Group

  • Licenses & Certifications