
Bram Koster
Project manager microscopy automation

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About me
Full professor Electron Microscopy
Education

Mr. S. Vissering Scholengemeenschap, Velsen, The Netherlands
1973 - 1979Pre-university Physics, Chemistry, Mathematics, English, German, DutchVoortgezet Wetenschappelijk Onderwijs (VWO)

Delft University of Technology
1979 - 1983Bachelor of Science (BSc) Engineering Physics/Applied Physics, Computer science
Delft University of Technology
1985 - 1989PhD Physics, System Control, Particle optics, Electron microscopy, Image Processing, Data Science
Delft University of Technology
1983 - 1985Master of Science (MSc) Physics, Systems and Signals, BA, Modeling, Parameter Estimation, Statistical Learning
Experience

TVIPS GmbH
Sept 1989 - Aug 1991Project manager microscopy automationAutomation of electron microscopy. Image processing. Digital image recording.

UCSF Medical Center
Sept 1991 - Aug 1993Postdoctoral Research FellowPostdoctoral fellow in the Molecular Structure group of David Agard. Development and application of specialized electron microscopy techniques: 3D Electron tomography, Automation,TEM, Stained sections, Chromatin.

Max-Planck-Institute for Biochemistry, Martinsried, Germany
Sept 1993 - Dec 1997Postdoctoral Research FellowPostdoctoral fellow in the Molecular Structural Biology group of Wolfgang Baumeister. Development and application of specialized electron microscopy techniques: 3D Cryo electron tomography, Automation, Cryo-TEM, Macromolecular structures, Proteasomes.

Utrecht University
Jan 1998 - Dec 2005Associate professor (UHD) in the group of Arie Verkleij. Acquisition of funding. Supervision of PhD students and technicians. Electron tomography. Development and application of specialized electron microscopy techniques: 3D Electron Microscopy, Electron Tomography, STEM, Energy-filtering, Gold-Labeling, Stained sections.
Staff Scientist Electron Microscopy
Jan 1998 - Dec 2005Research Fellow of the Royal Academy of Sciences (KNAW)
Jan 1998 - Dec 2002

Leiden University Medical Center
Jan 2006 - nowFull professor Electron Microscopy. Working on fundamental research topics as well as on advanced applications of light and electron microscopy techniques. Techniques and methods include cryo electron tomography, cryo electron microscopy, serial block face SEM and multimodal, multi-scale imaging. Interested in automation of microscopy workflows, ranging from instrumentation control to annotation of cell morphologies, using conventional image processing approaches as well as artificial intelligence and machine learning. Show less Management of the research group, defining long-term scientific research goals, acquisition of funding, collaborations with other scientific and industrial research groups, effective and efficient embedding of the microscopy research group within the Leiden University Medical Center to contribute to its overall mission. Management of the Section Light and Electron Microscopy, defining long-term research lines and positioning the Section with the overall organization of the Leiden University Medical Center. Roles in various in-house, national and international committees and organizations. Show less
Professor Electron Microscopy, Faculty of Medicine
Jan 2007 - nowHead Section Electron Microscopy
Jan 2006 - May 2022

Netherlands Center for Electron Nanoscopy (NeCEN)
Sept 2015 - Oct 2018Scientific DirectorNeCEN is the Netherlands Center of Electron Nanoscopy. NeCEN is the open access facility for cryo-TEM in The Netherlands. Management of the center, defining long-term scientific research goals, acquisition of funding, realizing collaborations with international scientific and industrial partners, effective and efficient embedding of the NeCEN within the Dutch and European electron microscopy community.

Leiden University
Sept 2015 - nowProfessor Nanobioimaging, Faculty of ScienceProfessor Nanobioimaging at the Faculty of Science within the Institute of Biology. Development and application of cryo electron microscopy methods and techniques.
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Centro Nacional de Biotecnología (CNB-CSIC)
Oct 2022 - Oct 2022Visiting ScientistCryo tomography workflows with Scipion

UCSF SCHOOL OF MEDICINE
Mar 2023 - May 2023SabbaticalCollaboration on cryo tomography structure determination methods in the Macromolecular Structure Group
Licenses & Certifications
- View certificate

Python for Everybody Specialization
CourseraApr 2021 - View certificate

Deep Learning Specialization
Coursera Course CertificatesDec 2020
Languages
- duDutch
- enEnglish
- geGeman
- frFrench
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