Jose Gavalda-Garcia, PhD

Jose Gavalda-Garcia, PhD

Followers of Jose Gavalda-Garcia, PhD535 followers
location of Jose Gavalda-Garcia, PhDBrussels, Brussels Region, Belgium

Connect with Jose Gavalda-Garcia, PhD to Send Message

Connect

Connect with Jose Gavalda-Garcia, PhD to Send Message

Connect
  • Timeline

  • About me

    PhD candidate @ RNAct

  • Education

    • Universitat Politècnica de València (UPV)

      2010 - 2014
      Bachelor's Degree Biotechnology

      Activities and Societies: Valencia_UPV iGEM 2014 team

    • Vrije Universiteit Amsterdam

      2014 - 2019
      Master's Degree Biomolecular Sciences

      Activities and Societies: Wushu team (Ying De Men)

    • Vrije Universiteit Amsterdam

      2015 - 2019
      Master's Degree Bioinformatics & Systems Biology

      Activities and Societies: Education Committee, Wushu team (Ying De Men)

  • Experience

    • Instituto de Biología Molecular y Celular de Plantas, IBMCP (UPV - CSIC)

      Sept 2013 - Oct 2014

      Student member in the UPV and Spanish National Research Council (CSIC) mixed iGEM team.

      • iGEM team member

        Mar 2014 - Oct 2014
      • Bachelor Student

        Sept 2013 - May 2014
    • Vrije Universiteit Amsterdam

      Feb 2015 - Jul 2015
      Masters Student Intern

      Currently working in a Masters Internship in the Systems Bioinformatics group under the supervision of Bas Teusink.

    • Vrije Universiteit Amsterdam

      Sept 2016 - Oct 2016
      Teaching Assistant

      As an Teaching Assistant for Principles/Fundamentals of Bioinformatics, my body of work is focused on managing students and contents for the course, assisting students in advancing their course projects and teaching them programming in Python.

    • Vrije Universiteit Amsterdam

      Jan 2017 - May 2017
      Master Researcher

      As a Master Researcher in the Systems Bioinformatics group, I am modeling the shift from lactic fermentation to acetate, ethanol and formate production in Lactococcus lactis under the direct supervision of Willi Gottstein.

    • Amsterdam University College

      Feb 2017 - May 2017
      Teaching Assistant

      As a teaching assistant for Genes, Bioinformatics and Disease, I guide and evaluate bachelor students through all their practicals.

    • Amsterdam UMC

      Sept 2017 - Jan 2019

      During this period, I wrote a literature review on epitope accessibility and its effect ondiagnosis of neurodegenerative diseases. Performed experiments to study the effect ofExtracellular Vesicles (EV) in Cerebrospinal Fluid for the diagnosis of neurodegenerativediseases and currently training a random forest classifier to predict EV location ofproteins given their sequence. As a Master Researcher in the Bioinformatics group at the AMC, I am developing a pipeline to link gene expression to metabolic levels, to obtain targets to treat metabolic disorders, under the supervision of Frans van der Kloet.

      • Masters Researcher

        Jan 2018 - Jan 2019
      • Master Researcher

        Sept 2017 - Feb 2018
    • Vrije Universiteit Amsterdam

      Nov 2017 - Dec 2017
      Teaching Assistant

      As a teaching assistant for Algorithms in Sequence Analysis, I guide and evaluate masters students through all their practicals. For this course, I have also created a brand new practical exercise in collaboration with Cico Zhang.

    • Amsterdam University College

      Feb 2018 - May 2018
      Teaching Assistant

      As a teaching assistant for Genes, Bioinformatics and Disease, I guide and evaluate bachelor students through all their practicals.

    • Vrije Universiteit Brussel

      Sept 2019 - now
      PhD Candidate
    • DataBeers Brussels

      Oct 2020 - now
      Co-organizer
  • Licenses & Certifications

    • Databases and SQL for Data Science with Python

      IBM
      Nov 2025
      View certificate certificate
    • VU Fellowship Programme

      Vrije Universiteit Amsterdam / VU University Amsterdam
    • Introduction to SQL

      DataCamp
      Jan 2023
    • VU Fellowship Programme

      Vrije Universiteit Amsterdam / VU
  • Honors & Awards

    • Awarded to Jose Gavalda-Garcia, PhD
      iGEM 2014 MIT Nov 2014 Best Part Collection and Gold Medal IGEM 2014International Genetically Engineered Machine Competition (iGEM), MIT, Cambridge, MA, US.noviembre de 2014Prize obtained as student member of the IGEM Valencia UPV Team 2014.
    • Awarded to Jose Gavalda-Garcia, PhD
      Vrije Universiteit Fellowship Program (VUFP) Grant VUFP Sep 2014 Grant awarded by the Vrije Universitei Fellowship Program (VUFP) to highly-motivated international masters students. This grant also provides the students invitations to events with big companies and special opportunities for networking.
  • Volunteer Experience

    • University Summer School Teacher

      Issued by Universitat Politècnica de València (UPV)
      Universitat Politècnica de València (UPV)Associated with Jose Gavalda-Garcia, PhD