You Wu

Experience

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  四川广电网络公司

  Jun 2014 - Mar 2015

  Data Analyst (Video on Demand)

  Implemented network technologies for improved FTTH planning and conducted technical diagnostics and performance optimizations

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  YOYOTIAN Clothing Store Co.

  Mar 2015 - May 2018

  Founder

  Founded and managed a successful women's clothing store, achieving positive ROI within a year while enhancing marketing strategies

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  Research Foundation of The City University of New York

  Sept 2020 - now

  Research Assistant

  - Applied graph neural networks (GNNs) on graph representation and classification for molecular property prediction - Devised self-supervised (pre) training schemes to construct feature encoding modules that can be easily tuned to adapt to different downstream tasks with zero-shot learning- Developed transfer learning methods to alleviate out-of-distribution (OOD) problems on noisy and heterogeneous omics data by aligning two data domains both locally and globally with autoencoders- Designed small molecule drug targeting the human microbiome using natural language programming (NLP) methods on protein sequence encoding and GNNs on molecule graph encoding Integrated hierarchical multi-omics data to reconstruct the high-resolution genome-scale/proteome-scale drug-target interactions, drug phenotypic response, and disease-gene association network. Used structural system pharmacology for drug repurposing for Alzheimer’s disease- Applied semi-supervised meta-learning to discover novel interspecies metabolite-protein interactions, advancing the understanding of microbiome-host interactions Show less

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  Genentech

  May 2023 - Nov 2023

  AI ML Researcher

  - Innovated Guided-STab, a pioneering framework with comprehensive RNA-seq data pretraining across various cancer types- Introduced novel tabular data augmentation techniques, enhancing predictive capabilities- Leveraged sparse clinical features as auxiliary multitask to guide and improve model performance

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  Hunter College

  Aug 2023 - Dec 2023

  Adjunct Lecturer

  Conducted lectures on CSCI493.76 Big Data Technologies, emphasizing non-SQL environments and utilizing tools like Hadoop, Spark, and NoSQL databases to equip students with diverse skills in data management, analysis, and processing