
Logan Hallee
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About me
CSO Synthyra - PhD Candidate Bioinformatics
Education

University of Delaware
2020 - 2022Bachelor of Science - BS Quantitative Biology GraduatedActivities and Societies: Undergraduate research, Phi Theta Kappa honors society, Sigma Xi honors society. Quantitative biology BS (applied mathematics to biology) in the mathematical sciences department. Minor in biochemistry.Science course load summary: Linear algebra, differential equations, computer science, computational math, probability theory, univariate and multivariate statistics, contemporary math, discrete math, computer-based genetics, systems biology, biochemistry, applied machine learning, and math techniques in data science.

Delaware Technical Community College
2018 - 2020Associate of Applied Science Biology/Biological Sciences, General GraduatedActivities and Societies: NJCAA division one cross country, math club, biochemistry club, Phi Theta Kappa honors society. Science course load summary: Multivariable calculus, physics with calculus, general chemistry, organic chemistry, microbiology, molecular biology, genetics, basic physiology, and general biology.Delaware Tech's focus in this program revolves around creating a great biotechnician. All science classes had an in-depth lab portion learning hands-on experience.

University of Delaware
2022 - 2027Doctor of Philosophy - PhD Bioinformatics and Data Science Second Year
Experience

New Balance
Jun 2018 - Nov 2020SupervisorNBRx fit specialist. Assisting customers with proper footwear and supervising sales associates. Our company worked closely with Podiatrists and Chiropractors in the area to help with clinical foot issues.

Delaware Technical Community College
Jan 2020 - Jul 2023Work with head coaches to tackle logistical problems, organize and run practices, meet day preparation, and recruit athletes. Math and physics tutoring, facilitating on-campus and virtual learning environments. Supplemental instruction (similar to a TA role) for inorganic chemistry courses at Delaware Technical Community College.
Assistant Cross Country Coach
Jul 2021 - Jul 2023Academic Support Assistant
Aug 2019 - Jul 2022Supplemental Instruction Leader
Jan 2020 - May 2020

University of Delaware
Jun 2021 - nowUndergraduate research in the Lam Lab. Assisted graduate students with projects studying heat shock proteins, protein interactions in cardiac cells, proteomics, and writing literature reviews. The research involved site-directed mutagenesis, PCR, producing recombinant plasmids, designing recombinant proteins, protein purification, transformation, gel electrophoresis, western blots, and data analysis. I have also maintained human-induced pluripotent stem cells and differentiated them into beating cardiomyocytes (animal cell culture). Show less
PHD Candidate
May 2024 - nowGraduate Student Researcher
Jul 2022 - Jun 2024Undergraduate Research Assistant
Jun 2021 - Jul 2022

Wolfram
Dec 2022 - Jan 2023Project InternParticipated in the Fundamental Science Wolfram Winter School 2023. This competitive program is a compilation of lectures and guided research. Winter School students learn about fundamental physics from the Wolfram Model and apply various findings to their research. I worked closely with many mentors from Wolfram Research including Stephen Wolfram himself, who helped define my project.I built a preliminary shape-based chemistry model in the Wolfram language called "Tetris for Proteins." The exact details of the 2-week project are published in the following blog post: https://community.wolfram.com/groups/-/m/t/2777595 Show less

Indiana University
Jun 2023 - Jul 2024Machine Learning ConsultantAdvising the Khomtchouk lab to best utilize machine learning techniques, exploring novel biomarkers and omics for better cardiac outcomes.

Synthyra
Jul 2024 - nowChief Scientific Officer and Co-FounderSynthyra is a Public Benefit LLC founded to enable and conduct protein science. I lead all R&D efforts, including computational modeling services, open source efforts, and broader research efforts to optimize specific metabolic pathways.
Licenses & Certifications
- View certificate

Getting Started with MongoDB Atlas
MongoDBApr 2023 - View certificate

MongoDB and the Document Model
MongoDBApr 2023 - View certificate

Connecting to a MongoDB Database
MongoDBApr 2023 - View certificate

MongoDB CRUD Operations: Insert and Find Documents
MongoDBApr 2023 - View certificate

Responsible Conduct of Research (RCR)
CITI ProgramJul 2022 - View certificate

MongoDB CRUD Operations: Modifying Query Results
MongoDBApr 2023 - View certificate

Data Parallelism: How to Train Deep Learning Models on Multiple GPUs
NVIDIAMar 2023 - View certificate

MongoDB CRUD Operations: Replace and Delete Documents
MongoDBApr 2023 - View certificate

Human Subjects Protections - Biomedical Focus - All UD Researchers/Faculty/Staff/Students
CITI ProgramJul 2022
Honors & Awards
- Awarded to Logan HalleeWilliam Clark Prize Mark Gockenback, Yvonne Ou May 2022 In recognition of unusual talent and ability in mathematics among the graduating seniors.
- Awarded to Logan HalleeUnidel Distinguished Graduate Scholars Fellowship University of Delaware Mar 2022 Highly competitive award offered to doctoral students by the University of Delaware. Used to recruit exceptional doctoral students and provide matriculated students with intellectual and professional experiences that foster the development of disciplinary and community leaders. 5 years of heightened graduate stipend plus additional research or travel-related expenses paid by the graduate college.
- Awarded to Logan HalleeAthletic Director's Award Mike Ryan, DTCC May 2020 Awarded to a student-athlete from the Delaware Tech athletic director based on merit,academics, and athletic performance.
- Awarded to Logan HalleeMath and Physics Department Outstanding Performance Award Delaware Technical Community College May 2020 Selected out of Delaware Technical Community College class of 2020
- Awarded to Logan HalleePresident's Award Mark Brainard, DTCC May 2020 Awarded to a student-athlete from the Delaware Tech president based on merit, academics,and athletic performance.
- Awarded to Logan HalleeTeam GPA Award Delaware Technical Community College May 2020 Highest GPA for the fall 2019 Delaware Tech cross country team.
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