Yashvardhan Jain

Experience

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  Graphiti XYZ

  May 2017 - Jun 2017

  Software Engineering Intern

  As a software engineering intern, I worked mainly on building REST services with the Spring-Boot framework and contributed to product development and architecture discussions. Some additional tasks included integrating Google authenticator and Payment Gateways(Stripe, Paypal, and Razorpay) with the product.Additionally, I had some experience with NoSQL databases (such as MongoDB), working with REACT, and deployment of applications on Amazon Web Services.

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  Indiana University Bloomington

  Feb 2020 - Mar 2020

  Computer Vision Lab Research Volunteer

  Investigating various methods and tools to visualize deep neural network architectures and their features to make them more interpretable. Working on dimensionality reduction and visualization of image data and metadata.

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  CNS - Indiana University Bloomington

  Oct 2020 - now

  - ML lead, under Dr. Katy Börner, working on multiple NIH-funded projects such as the Human BioMolecular Atlas Program, Cellular Senescence Network Program, and Kidney Precision Medicine Project.- Led the design, implementation, and analysis of 4 global machine learning Kaggle competitions, engaging 1000+ teams per competition, focussed on functional tissue unit and blood vasculature segmentation in PAS- and H&E-stained histology slides, and 3D HiP-CT datasets across multiple organs.https://www.kaggle.com/competitions/hubmap-kidney-segmentationhttps://www.kaggle.com/competitions/hubmap-organ-segmentationhttps://www.kaggle.com/competitions/hubmap-hacking-the-human-vasculaturehttps://www.kaggle.com/competitions/blood-vessel-segmentation - Containerized the ML models for production use in the HuBMAP Data Portal.- Working on single-cell segmentation, annotation, analysis, and visualization using tools such as Deepcell, MCMICRO, Scimap, Vitessce, etc. using antibody-based multiplexed imaging datasets (CODEX, Cell DIVE).- Regular collaboration with engineers and researchers from Stanford, Caltech, Johns Hopkins, University of Rochester Medical Center, and University College London across multiple projects.- Actively documenting results in high-quality research journals, including first-author publications.- Supervising graduate students as RAs in ML R&D for human atlas construction (https://humanatlas.io/). Show less

  • Research Software Engineer - Machine Learning

    Aug 2021 - now

  • Research Assistant

    Oct 2020 - Aug 2021