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Renske Wever

Renske Wever

Intern bioinformatics

Followers of Renske Wever235 followers
location of Renske WeverUtrecht, Utrecht, Netherlands

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  • Timeline

  • About me

    Scientist Bioinformatics bij SkylineDx BV

  • Education

    • Staring college lochem

      2009 - 2013
      HAVO NT

      Courses taken besides the standard curriculum : BiologyManagement and organisationChemistryMath BPhysics

    • Hogeschool van Arnhem en Nijmegen

      2013 - 2019
      Bachelor of Science - BS Bio-informatics

      Year 1Programming in Python (1)Detecting genetic mutations in hereditary diseasesProgramming in Python (2)Comparative genomics: Evolution of virusesAutomated identification of proteins via sequence comparisonSequence alignment (BLAST) and functional protein analysisYear 2Programming in JavaProteomics: protein structures, protein functions, separation techniques and data analysisData structures and algorithms in JavaTranscriptomics: Data analysis… Show more Year 1Programming in Python (1)Detecting genetic mutations in hereditary diseasesProgramming in Python (2)Comparative genomics: Evolution of virusesAutomated identification of proteins via sequence comparisonSequence alignment (BLAST) and functional protein analysisYear 2Programming in JavaProteomics: protein structures, protein functions, separation techniques and data analysisData structures and algorithms in JavaTranscriptomics: Data analysis regarding regulation of metabolic routesAnalysis and design techniquesGenomics: Annotating genomic DNAWeb technology and text miningMolecular phylogeny: Evolution, multiple sequence alignments regarding signal transductionYear 3+Data Mining and grid computingProteins: carcinogenesis and protein structuresRNA-seq, biostatistics, web services and workflowsInternship Bio-InformaticsResearch minorGraduate internship Show less

  • Experience

    • HAN BioCentre

      Aug 2017 - Jan 2018
      Intern bioinformatics

      Genome-wide identification of binding sites of rnt-1 in Caenorhabditis elegans.- Automated pipeline development for ChIP-Seq data in of python- ChIP-Seq data analysis- Identification of the binding sites of rnt-1 in Caenorhabditis elegans- Analysis of the binding sites with the use of WormMine, GOrilla and KEGG- Selection of targets for RNAi knockdown

    • HAN BioCentre

      Apr 2018 - Aug 2018
      Phylogeny research minor

      The construction of ConSiGnR : A tool that Connects Similarity scores to groups of Genomic Reads to support phylogenetic analysis- Literature review on the current state and use of phylogeny - Evaluation of a previously made tool, ConSiGnR- Creation of an in depth set-up for ConSiGnRtool- Software development (Java and Python)- Automatic creation of graphs using matplotlib

    • NIOO-KNAW

      Sept 2018 - Mar 2019
      Graduate student at the Department of Microbial Ecology

      Draft Genome of an Uncharacterized Chlorobiales- Analyzing metagenomics data- Assembly of high quality metagenomes- Annotation of metagenomes- Comparative genomics- Variance calling- Software development (Python and Bash)- Pipeline development

    • SkylineDx BV

      Jun 2019 - now

      • Scientist Bioinformatics

        Feb 2022 - now

      • Junior Scientist Bioinformatics

        Jun 2019 - Feb 2022

  • Licenses & Certifications

    • EdX Verified Certificate for Statistical Learning

      EdX
      Nov 2020
      View certificate certificate

    • EF SET English Certificate 78/100 (C2 Proficient)

      EF Standard English Test (EF SET)
      Oct 2019
      View certificate certificate

    • IVD Directive to IVD Regulation Transition Training Course

      BSI Training Academy
      Dec 2019