Minh Son PHAN

Experience

• 

  Fiisoft

  Jul 2009 - Mar 2010

  Web Developer

  I participated in the projects of hotel and trucker management.Programming: PHP, CakePHP, Javascript, AJAX, Google Map API.

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  Unitech (United Technologies Corporation)

  Apr 2011 - Jun 2011

  Engineering Internship

  I developed a cloud computing service that allows to create and manage a journal system.Programming: Java, Google App Engine, Google Web Toolkit.

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  ESIEE Paris & NII Tokyo

  Apr 2012 - Sept 2012

  Research Internship

  I developed a method for estimating parameters of a digital circle. The method allows to control the estimated error as a function of the running time.Highlights: Halfspace Range Searching, Quadtree.

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  Université de Strasbourg

  Oct 2013 - Sept 2016

  Improving 2D/3D tomographic reconstruction (X-Ray, CT, Cryo-EM).Highlights: Computed tomography, Graph algorithms, Hu moments, Nonlinear manifold embedding, Image denoising, Agglomerative clustering. I lectured students in the first, second years of Informatics and students in the first year of Master Bio-Informatics.Courses: Caml, UML, Algorithms and Programming, Data structures and Algorithms, Web programming, Databases.

  • PhD Researcher

    Oct 2012 - Sept 2016

  • Teaching Assistant

    Oct 2013 - Jul 2016
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  Ecole Polytechnique

  Nov 2016 - Dec 2020

  Postdoctoral Researcher

  Statistical learning from large-scale microscopic bioimages (fluorescence microscopy). Building tools for data simulation, quantification and visualisation.Highlights: Spatial statistics, Scale space, Color processing, Brownian motion, Optimal transport, Agglomerative clustering, U-Net, Cycle-GAN.Developing tools: Connectomic viewer, GeNePy3D, Omero-Catmaid bridge.

• 

  Institut Pasteur

  Dec 2020 - now

  Research Engineer in BioImage Analysis

  Building bioimage analysis pipeline from microscope (confocal, spinning disk, brightfield, etc) and camera.Time-series data analysis.Developing open-source tools/software.